p-value: | 1e-10 |
log p-value: | -2.349e+01 |
Information Content per bp: | 1.629 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 2.19% |
Number of Background Sequences with motif | 96.5 |
Percentage of Background Sequences with motif | 0.31% |
Average Position of motif in Targets | 55.6 +/- 23.1bp |
Average Position of motif in Background | 53.1 +/- 21.8bp |
Strand Bias (log2 ratio + to - strand density) | -1.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC ----CTGTCTGG---- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC --VBSYGTCTGG---- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | MSTCCCGKCTGSYKCC- NNTNNTGTCTGGNNTNG |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC- ----CTGTCTGTCACCT |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --MSTCCCGKCTGSYKCC TACGCCCCGCCACTCTG- |
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SP2/MA0516.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC -GCCCCGCCCCCTCCC |
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NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC ---GCCATCTGTT--- |
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E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MSTCCCGKCTGSYKCC -TTCCCGCCWG----- |
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PB0124.1_Gabpa_2/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC---- ----CCGTCTTCCCCCTCAC |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | MSTCCCGKCTGSYKCC ----TWGTCTGV---- |
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