Information for 10-TCACGTTGCC (Motif 18)

A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
Reverse Opposite:
A T C G C T A G G T A C G T C A C G T A T A G C A C T G A C G T A C T G G T C A
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.842
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif94.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.7 +/- 27.6bp
Average Position of motif in Background53.4 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCACGTTGCC
GCACGTACCC
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTTGCC
GTCACGTGGM-
 A C G T A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCACGTTGCC
ACACGTGGC-
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCACGTTGCC
TCACGTGACC
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCACGTTGCC--
TCACGTGACCGG
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCACGTTGCC
-CACGTGGC-
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCACGTTGCC
GKVTCADRTTWC-
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCACGTTGCC
-CACGTG---
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCACGTTGCC
-CACGTGGN-
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCACGTTGCC
GCACGTAY--
 A C G T A G T C C G T A G T A C A T C G G A C T A C G T A C T G A G T C A T G C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T