Information for 7-GCCCCHAGGC (Motif 10)

A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C
Reverse Opposite:
C T A G A G T C A G T C A C G T C A G T C T A G A C T G A T C G C T A G A G T C
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.807
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif865.9
Percentage of Background Sequences with motif1.79%
Average Position of motif in Targets59.3 +/- 26.2bp
Average Position of motif in Background49.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GCCCCHAGGC-
TGCCCCCGGGCA
 A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GCCCCHAGGC-
TGCCCCAGGGCA
 A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCCCHAGGC-
TGCCCCAGGGCA
 A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCHAGGC--
NTGCCCTTGGGCGN
 A C G T A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GCCCCHAGGC--
TTGCCCTAGGGCAT
 A C G T A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCCCCHAGGC
ATGCCCTGAGGC
 A C G T A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCHAGGC--
NTGCCCANNGGTNA
 A C G T A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCHAGGC
WTGSCCTSAGGS
 A C G T A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCHAGGC--
TGCCCTNAGGGCA
 A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCHAGGC--
TGCCCTNAGGGCA
 A C G T A C T G A G T C A T G C G T A C A G T C G T C A T G C A A C T G C T A G A G T C A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A