Information for 4-WDGMWAAMAAATGTCA (Motif 5)

C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A
Reverse Opposite:
C G A T A C T G T C G A T A G C G T C A C G A T C A G T C A G T C A G T G C A T A G C T C G A T C A G T G T A C G T C A G C A T
p-value:1e-20
log p-value:-4.659e+01
Information Content per bp:1.567
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.08%
Number of Background Sequences with motif696.3
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets55.1 +/- 23.3bp
Average Position of motif in Background49.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA----
----TCTCAAAGGTCACCTG
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:WDGMWAAMAAATGTCA
----ANGNAAAGGTCA
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A
A C G T A C G T A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA----
----TCTCAAAGGTCACGAG
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.71
Offset:6
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA
------ATCAAGGTCA
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.71
Offset:8
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA-
--------AAAAGTCAA
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.70
Offset:7
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA-
-------CAAAGGTCAG
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.70
Offset:7
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA----
-------CAAAGGTCAAGGG
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.68
Offset:9
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA-
---------AAGGTCAC
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:WDGMWAAMAAATGTCA-
-------TCAAGGTCAN
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.65
Offset:8
Orientation:forward strand
Alignment:WDGMWAAMAAATGTCA
--------TRAGGTCA
 C G T A C A G T C A T G G T C A G C T A T C G A C G T A G T C A G T C A G T C A C G T A C A G T A T C G A G C T T G A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A