Information for 23-GWGGTNATCAGTCACC (Motif 35)

A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
Reverse Opposite:
A C T G T A C G A C G T A C T G T C G A A G T C A C G T C T A G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A T G C
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.793
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 23.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GWGGTNATCAGTCACC
TNAGNTGATCAACCGGT
 A C G T A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GWGGTNATCAGTCACC
--RGCCATYAATCA--
 A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
A C G T A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T

PH0050.1_Hoxa3/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GWGGTNATCAGTCACC
TTGAGGTAATTAGT----
 A C G T A C G T A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
C A G T A G C T T A C G G T C A T C A G A T C G A G C T G T C A G T C A A C G T A C G T C T G A T C A G A G C T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GWGGTNATCAGTCACC
GARTGGTCATCGCCC---
 A C G T A C G T A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GWGGTNATCAGTCACC
TGGAGGTAATTAAC----
 A C G T A C G T A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C A C G T A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GWGGTNATCAGTCACC
--GNTAATTAGN----
 A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
A C G T A C G T A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T A C G T A C G T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GWGGTNATCAGTCACC--
--ATTGATGAGTCACCAA
 A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C A C G T A C G T
A C G T A C G T T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GWGGTNATCAGTCACC
CAAAGGTCAAGGG-----
 A C G T A C G T A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GWGGTNATCAGTCACC
AGRGGTCA---------
 A C G T A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GWGGTNATCAGTCACC
-----NATGAGTCACC
 A T C G C G A T A C T G A C T G A C G T A G T C G T C A A C G T A G T C C G T A A C T G A C G T A G T C T C G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C