Information for 23-ATTTATGCACTTA (Motif 34)

C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A C G T A T C G A G T C C G T A A C G T C G T A C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.2 +/- 8.0bp
Average Position of motif in Background49.8 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATGCACTTA---
NATTTAAGTACTTANNA
 A C G T C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATGCACTTA
ANATTTTTGCAANTN
 A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATGCACTTA---
NATTTAAGTACTTNAAA
 A C G T C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTTATGCACTTA---
CTTTAAGTACTTAATG
 C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ATTTATGCACTTA-
------GCACTTAA
 C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATTTATGCACTTA-----
-CATAACCACTTAACAAC
 C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATTTATGCACTTA-
----AAGCACTTAA
 C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATGCACTTA
TGATTTATGGCC---
 A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATGCACTTA
TGATTTATGGCC---
 A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATGCACTTA
NTGATTTATGGCC---
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G A T A C T G A T G C C G T A A G T C A C G T G C A T C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T