Information for 22-CCCWGCCTGGCTGGGC (Motif 33)

A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
Reverse Opposite:
T A C G T A G C T A G C A T G C C G T A T A C G A T G C T G A C C T G A A C T G A T C G G A T C G C A T T A C G A C T G T A C G
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.568
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif1075.3
Percentage of Background Sequences with motif2.30%
Average Position of motif in Targets50.8 +/- 21.7bp
Average Position of motif in Background48.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCWGCCTGGCTGGGC
GTCATGCHTGRCTGS--
 A C G T A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC
-GGGGCTYGKCTGGGA
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC-
-------WDNCTGGGCA
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCWGCCTGGCTGGGC---
--NAGANTGGCGGGGNGNA
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC--
----ACATGCCCGGGCAT
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC
------CTGTCTGG--
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC---
-------TGTCAGGGGGCG
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCWGCCTGGCTGGGC
NGTCACGCTTGGCTGC--
 A C G T A C G T A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC
---GGTCTGGCAT---
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCCWGCCTGGCTGGGC
----VBSYGTCTGG--
 A T G C T G A C A T G C C G T A C T A G T A G C T G A C G A C T A C T G A T C G A G T C G C A T T A C G A T C G A T C G A T G C
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T