Information for 22-GAGTGGATCTAGT (Motif 39)

C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
Reverse Opposite:
T C G A A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C G A C T A G T C
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAGTGGATCTAGT
--GTGGAT-----
 C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGTGGATCTAGT---
-BCNGGTTCTAGANCN
 C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T A C G T A C G T A C G T
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGATCTAGT
TTRAGTGSYK-----
 A C G T A C G T C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAGTGGATCTAGT
TGCGGAGTGGGACTGG-
 A C G T A C G T A C G T A C G T C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGATCTAGT
CTTGAGTGGCT-----
 A C G T A C G T A C G T C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGATCTAGT
TTGAGTGSTT-----
 A C G T A C G T C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAGTGGATCTAGT
---NGGATTAN--
 C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GAGTGGATCTAGT
AAATTCAAGTGGNTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GAGTGGATCTAGT
AATNTTAAGTGGNTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGTGGATCTAGT
-TGTGGATTNNN-
 C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T