Information for 20-GTGCTCTTTGTCC (Motif 36)

T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C
Reverse Opposite:
C A T G A C T G C T G A A T G C G T C A T C G A C T G A T A C G T C G A A C T G G T A C T G C A A G T C
p-value:1e-7
log p-value:-1.666e+01
Information Content per bp:1.662
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif209.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets49.1 +/- 23.5bp
Average Position of motif in Background52.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC---
-TGACCTTTGCCCTAN
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC--
-TGACCTTTGCCCTA
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTGCTCTTTGTCC--
-TGACCTTTGCCCCA
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC---
-TGGACTTTGNNCTCN
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC----
-TGGACTTTGNNCTNTG
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC--
-TGACCTTTGACCTN
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC--
-TGACCTTTGACCCC
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC--
-TGACCTTTGACCTC
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTGCTCTTTGTCC-
----YCTTTGTTCC
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTTTGTCC--
-TGACCTTTGACCCC
 T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C