Information for 9-CACGCACGCA (Motif 30)

A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A
Reverse Opposite:
A G C T A C T G G T A C A C T G A C G T A C T G A T G C C T A G C A G T A C T G
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.843
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif76.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.7 +/- 27.1bp
Average Position of motif in Background47.5 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CACGCACGCA-
-TBGCACGCAA
A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CACGCACGCA
CRCCCACGCA
A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:CACGCACGCA
----CACGCA
A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

EGR2/MA0472.2/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CACGCACGCA
ACGCCCACGCA
A C G T A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CACGCACGCA--
CTACGCCCACGCACT
A C G T A C G T A C G T A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

EGR4/MA0733.1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CACGCACGCA---
TTACGCCCACGCATTT
A C G T A C G T A C G T A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CACGCACGCA
YCCGCCCACGCN
A C G T A C G T A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACGCACGCA-
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C G T A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CACGCACGCA-
---GCACGTAY
A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACGCACGCA
--BGCACGTA
A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A