Information for 19-GTCAYSCASKMCTGTG (Motif 29)

A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
Reverse Opposite:
A T G C C T G A A G T C C G T A A C T G A C G T G T A C T A C G A C G T A C T G T A G C C T G A A C G T A C T G C G T A A G T C
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.861
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTCAYSCASKMCTGTG
NGTCACGCTTGGCTGC-
 A C G T A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

PAX9/MA0781.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCAYSCASKMCTGTG
CGTCACGCATGACTGCA
 A C G T A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCAYSCASKMCTGTG
CGTCACGCATGACTGCA
 A C G T A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCAYSCASKMCTGTG
GTCATGCHTGRCTGS-
 A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCAYSCASKMCTGTG---
GTCACGCTTGGCTGCNCNN
 A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCAYSCASKMCTGTG
AGTCACGC---------
 A C G T A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCAYSCASKMCTGTG
GTCATN----------
 A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GTCAYSCASKMCTGTG
----------GCTGTG
 A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCAYSCASKMCTGTG
AGGTCACCCTGACCT---
 A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTCAYSCASKMCTGTG
ACGTCATC----------
 A C G T A C G T A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T