Information for 7-WAKGCCAARKGTMATC (Motif 11)

G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G C G T A A G T C G T C A A G C T A C G T A C G T A C T G A C T G A G T C G T C A A G C T C G A T
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.859
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 13.1bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WAKGCCAARKGTMATC
AAAGGTCAAAGGTCAAC
 A C G T G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
TAGGGCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
GAGGTCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-WAKGCCAARKGTMATC
GTAGGGCAAAGGTCA--
 A C G T G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:WAKGCCAARKGTMATC
TGGGGCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
GAGGTCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
GGGGTCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
GGGGTCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
GGGGTCAAAGGTCA--
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WAKGCCAARKGTMATC
GGTGCCAAGT------
 G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T