Information for 7-TAGCCCTCTAGTT (Motif 10)

A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T
Reverse Opposite:
G T C A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C T A G A C T G A G T C C G A T C G T A
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 22.1bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAGCCCTCTAGTT----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGCCCTCTAGTT----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAGCCCTCTAGTT--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TAGCCCTCTAGTT
-NSCACTYVAV--
 A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAGCCCTCTAGTT------
--GAAAACTAGTTAACATC
 A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAGCCCTCTAGTT-
NTGCCCANNGGTNA
 A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TAGCCCTCTAGTT
-RSCACTYRAG--
 A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCCTCTAGTT
CNAGGCCT------
 A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TAGCCCTCTAGTT---
------ACTAGTTAAC
 A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TAGCCCTCTAGTT
AGCCACTCAAG--
 A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T