Information for 7-ATDCTGTCTCCTGVCA (Motif 9)

C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C T G A C C T G A A C T G A C T G C G T A A C T G C T G A G T A C C T G A A C T G G C T A G T C A A G C T
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.781
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 28.7bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA
----CGCCCCCTGACA
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A
A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA-
---NNGTCGCGTGNCAC
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A A C G T
A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATDCTGTCTCCTGVCA---
----TGTTKCCTAGCAACM
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA
----TGACACCTGTCA
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A
A C G T A C G T A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA-
---------CTTGGCAA
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA
-----NCTTCCCGCCC
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATDCTGTCTCCTGVCA--
------TTTCCCGCCAAA
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA
-----NNTTCCCGCCC
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATDCTGTCTCCTGVCA---
-----TTTTCCCGCCAAAA
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATDCTGTCTCCTGVCA
----TGACACCTGTCA
 C T G A C A G T C A G T A G T C A G C T A C T G A G C T A G T C C G A T A G T C A G T C A G C T A C T G T C A G A G T C G T C A
A C G T A C G T A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A