Information for 1-TCTGTGTGGHACC (Motif 3)

A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C A T G G T A C A G T C C G T A A G T C C G T A G T A C C T G A A T C G C G T A
p-value:1e-14
log p-value:-3.359e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 28.9bp
Average Position of motif in Background60.6 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTGTGTGGHACC-
-CTGTCTGTCACCT
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTGTGTGGHACC-
--TGTCTGDCACCT
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTGTGTGGHACC
-CTTTGT------
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTGTGTGGHACC
TGGGTGTGGC---
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCTGTGTGGHACC-
------TGACACCT
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCTGTGTGGHACC
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCTGTGTGGHACC
NTGGGTGTGGCC--
 A C G T A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCTGTGTGGHACC
CCWTTGTYYB---
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCTGTGTGGHACC----
GCTGGGGGGTACCCCTT
 A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TCTGTGTGGHACC--
TGCGGAGTGGGACTGG
 A C G T A C G T A T G C G A C T A C T G A C G T A C T G A C G T T C A G A C T G G A T C C G T A A G T C A G T C A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G