Information for 3-CATATAGCAATGTGAG (Motif 7)

A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C C G T A A T G C C G T A A C G T A C G T A C T G G T A C A C G T G T C A A C G T C G T A A C G T A C T G
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 22.4bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CATATAGCAATGTGAG
------KCCACGTGAC
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CATATAGCAATGTGAG-
------GTCATGTGACC
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CATATAGCAATGTGAG--
------GWAAYHTGABMC
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CATATAGCAATGTGAG
--NNTNNCAATATTAG
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CATATAGCAATGTGAG
--NNTNNCAATATTAG
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CATATAGCAATGTGAG
----NAACAAT-----
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CATATAGCAATGTGAG----
-----AACAATGGTAGTGTT
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CATATAGCAATGTGAG
CCGCATAGCAACGGA--
 A C G T A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CATATAGCAATGTGAG
ACCATATGGC--------
 A C G T A C G T A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CATATAGCAATGTGAG
----NTGGAATGTG--
 A G T C G T C A C G A T C G T A A C G T C G T A A C T G A G T C G T C A C G T A A C G T A T C G A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T