Information for 2-AACAAAACAC (Motif 5)

G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C
Reverse Opposite:
A C T G C A G T T A C G A C G T A C G T C A G T G C A T A C T G G C A T C A G T
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.623
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif395.4
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets49.1 +/- 25.1bp
Average Position of motif in Background49.2 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AACAAAACAC----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AACAAAACAC
AAATAAACA-
 G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AACAAAACAC--
CAAAAGTAAACAAAG
 A C G T A C G T A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AACAAAACAC--
CAAACAACAACACCT
 A C G T A C G T A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAACAC--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACAAAACAC--
AAACAAACATTC
 G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AACAAAACAC----
ATATCAAAACAAAACA
 A C G T A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AACAAAACAC
AAAGTAAACA-
 A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACAAAACAC-
AAGTAAACAAA
 G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C A C G T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AACAAAACAC
AAAGTAAACA-
 A C G T G T C A C G T A T G A C C G T A G T C A G T C A T G C A A T G C G T C A T G A C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T