p-value: | 1e-12 |
log p-value: | -2.936e+01 |
Information Content per bp: | 1.696 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.02% |
Number of Background Sequences with motif | 6.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.8 +/- 22.3bp |
Average Position of motif in Background | 43.5 +/- 9.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG-- ------CCCCCTGCTGTG |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TTAACTYGCCCTGCTG--- ---------CCTGCTGAGH |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG----- ------TNTCCTGCTGTGNNG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG----- ------TCNCCTGCTGNGNNN |
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Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG--- ---------HCAGCTGDTN |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTAACTYGCCCTGCTG--- ----GGCCYCCTGCTGDGH |
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Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG--- ---------CCAGCTGTTN |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG----- ------NNTCCTGCTGTGNNN |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | TTAACTYGCCCTGCTG-- ----------CAGCTGNT |
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Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTAACTYGCCCTGCTG-- ------NNVVCAGCTGBN |
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