Information for 18-CCTAATGKKWGADKCM (Motif 29)

A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
Reverse Opposite:
A C T G C T A G G T C A G T C A C A G T A T G C C G T A T G C A G T A C A G T C C G T A A G C T C G A T C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.666e+01
Information Content per bp:1.607
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif59.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets39.2 +/- 24.1bp
Average Position of motif in Background56.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
-CTAATCGNT------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
-NTAATTGN-------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
-NTAATKGTTT-----
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
NNTAATTANN------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
-NTAATTGG-------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTAATGKKWGADKCM
GCTAATTGCT------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
-CTAATTAN-------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTAATGKKWGADKCM
NNTAATTANN------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCTAATGKKWGADKCM
-CTAATKGV-------
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCTAATGKKWGADKCM
---AAGGTGTGAA---
 A G T C T G A C G C A T G C T A C T G A C G A T T C A G C A T G A C G T G C A T A T C G G T C A C A G T A C G T G A T C G T A C
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T