Information for 23-GMTAGAGGCAAGAGGG (Motif 26)

A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G
Reverse Opposite:
G T A C G T A C G A T C A C G T A T G C C G A T A C G T A T C G T A G C A G T C A C G T A T G C G A C T C G T A A C T G A T G C
p-value:1e-8
log p-value:-1.882e+01
Information Content per bp:1.657
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif113.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.2 +/- 22.9bp
Average Position of motif in Background50.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG
----AAGGCAAGTGT-
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG--
-----ATGCAACAGGTGG
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG----
--------CAAGATGGCGGC
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG----
-----GAGCAACAGGTGGTT
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG--
----TAGGGCAAAGGTCA
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG--
---AGGGGTCAGAGGTCA
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG--
----GAGGTCAAAGGTCA
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GMTAGAGGCAAGAGGG
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG--
---GTAGGGCAAAGGTCA
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GMTAGAGGCAAGAGGG----
--------CAAGATGGCGGC
 A T C G T G A C C G A T C G T A A T C G T C G A T A C G A T C G T A G C T G C A C G T A A T C G C G T A C A T G A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C