Information for 11-GTTATGTTGC (Motif 21)

A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C G T A A G T C C G T A G A C T C G T A C T G A G T A C
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.861
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif78.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.3 +/- 25.3bp
Average Position of motif in Background49.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTTATGTTGC--
--NATGTTGCAA
 A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTTATGTTGC-----
---CTGTTGCTAGGS
 A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTATGTTGC--
NNGTANTGTTTTNC
 A C G T A C G T A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTATGTTGC-----
GTNTTGTTGTGANNT
 A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTATGTTGC
GKMTCADRTTWC
 A C G T A C G T A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTTATGTTGC-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTATGTTGC-----
ANATTTTTGCAANTN
 A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTATGTTGC
GKVTCADRTTWC
 A C G T A C G T A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTATGTTGC-----------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTTATGTTGC-------
--NCCGTTGCTANGNGN
 A C T G A G C T G C A T C T G A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G