Information for 7-CAGGCCTAGTCCA (Motif 13)

A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A G T C A C G T C G T A A C T G A T C G A G T C A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 16.0bp
Average Position of motif in Background55.4 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGGCCTAGTCCA
-AGGCCTAG----
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAGGCCTAGTCCA
-AGGCCTNG----
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTAGTCCA-
CAGGCCNNGGCCNN
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGGCCTAGTCCA---
GAGCCCTTGTCCCTAA
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGCCTAGTCCA----
-GGCAAAAGTCCAATAA
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGGCCTAGTCCA
-AGGTCAAGGTCA
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGGCCTAGTCCA
-AGGTCAAGGTCA
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGCCTAGTCCA
----GCTAATCC-
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGGCCTAGTCCA--
AAGTTCAAGGTCAGC
 A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCTAGTCCA
ACATGCCCGGGCAT
 A C G T A G T C G T C A A C T G A C T G A T G C A G T C C G A T C G T A A C T G C G A T A G T C A G T C C G T A
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T