Information for 4-TGSCCCKSGMAGC (Motif 9)

A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T A C G T T A G C A T C G G T A C C T A G A C T G A C T G A T C G A G T C C G T A
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 29.2bp
Average Position of motif in Background58.1 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGSCCCKSGMAGC
NNNNTGACCCGGCGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TGSCCCKSGMAGC
-------NGAAGC
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGSCCCKSGMAGC-
TTGCCATGGCAACN
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGSCCCKSGMAGC
GTTGCCATGGCAAC
 A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TGSCCCKSGMAGC-
---------CAGCC
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGSCCCKSGMAGC
ATGCCCACC-----
 A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGSCCCKSGMAGC
TGACCT-------
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGSCCCKSGMAGC-
TTGCCATGGCAACC
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGSCCCKSGMAGC
CTGACCTTTG----
 A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGSCCCKSGMAGC
-------CGGAGC
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A T G C A T C G G T C A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C