Information for 2-TKCTACWYAMAAA (Motif 5)

A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C G T C G A T C T G A C G T A A C T G A C G T C G T A A C T G G T A C C G T A
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 29.6bp
Average Position of motif in Background80.7 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TKCTACWYAMAAA
ACTTGCTACCTACACC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TKCTACWYAMAAA
ACATGCTACCTAATAC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TKCTACWYAMAAA-----
-GTTCAAAAAAAAAATTC
 A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TKCTACWYAMAAA-
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TKCTACWYAMAAA--
ATTTGCATACAATGG
 A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TKCTACWYAMAAA-
----CCYMATAAAA
 A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TKCTACWYAMAAA----
---TACTGGAAAAAAAA
 A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TKCTACWYAMAAA
NTTGATACATT----
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TKCTACWYAMAAA
ANGTTACATAA---
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TKCTACWYAMAAA-
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G A T A G C T C G T A G T C A C G T A C G T A C T G A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C