Information for 5-GCAGGCCTAAGGT (Motif 8)

A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T
Reverse Opposite:
C G T A A G T C T A G C A C G T A C G T C T G A A C T G A C T G A G T C A G T C A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 21.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCAGGCCTAAGGT
--AGGCCTNG---
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCAGGCCTAAGGT
--AGGCCTAG---
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCAGGCCTAAGGT--
-CAGGCCNNGGCCNN
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCAGGCCTAAGGT--
-NTGCCCANNGGTNA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAGGCCTAAGGT--
-GAGGTCAAAGGTCA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGGCCTAAGGT--
-TAGGGCAAAGGTCA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGGCCTAAGGT--
GTAGGGCAAAGGTCA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAGGCCTAAGGT--
-GAGGTCAAAGGTCA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAGGCCTAAGGT--
-GGGGTCAAAGGTCA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCAGGCCTAAGGT-
---AGCCTCAGGCA
 A C T G A G T C C G T A A C T G A C T G A G T C A G T C A G C T C G T A G T C A A T C G A C T G A C G T A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A