Information for 2-CAHAVGCCCATGGCCT (Motif 3)

A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A G T C A G T C G T C A A C G T A C T G A C T G A C T G A T G C A C G T A C G T C T A G A C G T A T C G
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.815
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.7 +/- 22.9bp
Average Position of motif in Background40.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAHAVGCCCATGGCCT-
---GGGGCCGAGGCCTG
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAHAVGCCCATGGCCT
----CGCCTCAGGCA-
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAHAVGCCCATGGCCT-
---CCGCCCAAGGGCAG
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAHAVGCCCATGGCCT
----AGCCTCAGGCA-
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAHAVGCCCATGGCCT
----AGCCTCAGGCA-
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CAHAVGCCCATGGCCT
--------CTAGGCCT
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CAHAVGCCCATGGCCT
--------CNAGGCCT
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAHAVGCCCATGGCCT-
---TCACCTCTGGGCAG
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T A C G T
A C G T A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAHAVGCCCATGGCCT
----TGACCTTGACCT
 A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAHAVGCCCATGGCCT
AAGCATACGCCCAACTT--
 A C G T A C G T A C G T A T G C G T C A G A C T G T C A T C G A A T C G T A G C A G T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C A G C T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T A C G T