Information for 17-TGAGACCTGCACA (Motif 27)

A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C T G A G T C C G T A A C T G A C T G A C G T A T G C A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.166e+01
Information Content per bp:1.922
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 22.3bp
Average Position of motif in Background22.2 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGAGACCTGCACA
SNGCACCTGCHS-
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGACCTGCACA
--NCACCTGTN--
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGAGACCTGCACA
ATAAATGACACCTATCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAGACCTGCACA
TGACACCT-----
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAGACCTGCACA
-NNCACCTGNN--
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGACCTGCACA
NNNNTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGAGACCTGCACA
-TACACCTGTC--
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGACCTGCACA
-AACACCTGCT--
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGACCTGCACA
TCACACCT-----
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAGACCTGCACA
TCACACCT-----
 A C G T A C T G C G T A A T C G G T C A A G T C A G T C A C G T A C T G A G T C C G T A G T A C C G T A
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T