Information for 11-GCCTAGGGTG (Motif 25)

C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
Reverse Opposite:
G A T C G T C A T A G C A G T C G A T C C G A T C G T A C T A G A T C G G A T C
p-value:1e-6
log p-value:-1.416e+01
Information Content per bp:1.669
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.81%
Number of Background Sequences with motif1877.0
Percentage of Background Sequences with motif4.11%
Average Position of motif in Targets51.1 +/- 27.9bp
Average Position of motif in Background50.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGGTG
AGGCCTAG----
 A C G T A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGGTG
AGGCCTNG----
 A C G T A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAGGGTG
TGACCTTGAN--
 A C G T A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCTAGGGTG-
---TWGTCTGV
 C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAGGGTG
TGACCTTGAV--
 A C G T A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCTAGGGTG---
--CTTGAGTGGCT
 C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGTG
NGCCTGAGGCN
 A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCTAGGGTG--
GGCACCCAGGGGTGC
 A C G T A C G T A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGTG
TGTCTAGACG-
 A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGTG
TGCCTGAGGCN
 A C G T C T A G T A G C A G T C C G A T G C T A C T A G T C A G A T C G C A G T C T A G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T