Information for 7-GGCTGGTTAG (Motif 19)

T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G
Reverse Opposite:
A G T C A G C T G C T A C G T A A G T C G T A C C G T A C T A G G T A C A T G C
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.842
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.7 +/- 24.7bp
Average Position of motif in Background55.6 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGCTGGTTAG----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTGGTTAG-
-ACTAGTTAAC
 T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCTGGTTAG---
--CAGGTAAGTAT
 T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGGTTAG-----
ANNNCTAGTTAACNGNN
 A C G T A C G T T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGGTTAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGGTTAG----
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTGGTTAG
NGCTN-----
 T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCTGGTTAG----
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCTGGTTAG-
--CAGGTGAGG
 T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G A C G T
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGTTAG
TWGTCTGV----
 A C G T A C G T T A C G A C T G A G T C C G A T A C T G A C T G G C A T C G A T C T G A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T