Information for 3-RYGKRMAAKGTAG (Motif 2)

T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G
Reverse Opposite:
A G T C A C G T G T C A A G T C G T C A A G C T A C G T A C G T A G T C G T A C A G T C C T G A A G C T
p-value:1e-21
log p-value:-4.847e+01
Information Content per bp:1.799
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 29.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:RYGKRMAAKGTAG-
--GGGAATTGTAGT
 T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G A C G T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----RYGKRMAAKGTAG--
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----RYGKRMAAKGTAG--
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RYGKRMAAKGTAG
NATGGAAAAN----
 A C G T T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RYGKRMAAKGTAG
AATGGAAAAT----
 A C G T T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RYGKRMAAKGTAG
-TGGAAAA-----
 T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RYGKRMAAKGTAG
AATGGAAAAT----
 A C G T T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-RYGKRMAAKGTAG
CSTGGGAAAD----
 A C G T T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RYGKRMAAKGTAG-----
--ATTTACAGTAGCAAAA
 T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RYGKRMAAKGTAG-----
--ATGTACAGTAGCAAAG
 T C G A A G C T A C T G A C T G C T A G T G C A C G T A C T G A A C G T C T A G C A G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G