Information for 15-CAACTCCAAG (Motif 18)

A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G
Reverse Opposite:
G T A C G C A T A C G T A C T G A T C G C G T A A C T G A C G T A G C T A C T G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif137.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets54.2 +/- 31.0bp
Average Position of motif in Background47.8 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAACTCCAAG--
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAACTCCAAG
CCAACTGCCA-
 A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAACTCCAAG
CCAACTGCCA-
 A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAACTCCAAG-----
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAACTCCAAG-
CGACCAACTGCCGTG
 A C G T A C G T A C G T A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAACTCCAAG
CCACTTGAA-
 A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAACTCCAAG
AAACCGCAA-
 A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAACTCCAAG--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAACTCCAAG-----
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAACTCCAAG
NSCACTYVAV-
 A C G T A G T C T C G A T G C A A G T C A C G T T A G C A G T C T G C A C G T A A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T