Information for 11-GGTCAGGGTGACC (Motif 16)

A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A T G C C G T A A G T C A G T C A G T C A C G T A C T G C T G A A G T C A G T C
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 16.5bp
Average Position of motif in Background57.2 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGTCAGGGTGACC--
GGTCANNGTGACCTN
 A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GGTCAGGGTGACC-
AGGNCANNGTGACCT
 A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGGGTGACC--
CAGGTCACCGTGACCTT
 A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGGGTGACC----
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTGACC
AGGTCAAGGTCA--
 A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTGACC
AGGTCAAGGTCA--
 A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGGGTGACC
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTCAGGGTGACC
--TCAAGGTCAN-
 A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTCAGGGTGACC
-BTCAAGGTCA--
 A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTGACC--
CGCGCCGGGTCACGTA
 A C G T A C T G A C T G A G C T A G T C C G T A A C T G A C T G A C T G A C G T A T C G C G T A G T A C A G T C A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A