Information for 9-ATTAAATAAATTC (Motif 11)

C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A G T C A A C G T A C G T A C G T C T G A A C G T A C G T A C G T C G T A C T G A A C G T
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 18.7bp
Average Position of motif in Background52.2 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0095.1_Lhx5/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAAATTC-
CGAATTAATTAAATACT
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0093.1_Lhx3/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAAATTC-
GAAATTAATTAAATAAT
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATAAATTC-
NNAATTAATTAAAAANN
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0100.1_Lmx1a/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAAATTC-
CGAATTAATTAAAAACC
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0091.1_Lhx1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAAATTC-
CGAATTAATTAATAATG
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0011.1_Alx1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTAAATAAATTC
NNNAATTAATTAANGNG
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G

PH0149.1_Pou3f4/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATTAAATAAATTC
AATTAATTAATTAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATTAAATAAATTC
AATTAATTAATTAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATAAATTC-
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTAAATAAATTC
ATTAAA-------
 C G T A A G C T A C G T C G T A C G T A C G T A A G C T C G T A C G T A C G T A A C G T A G C T A G T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T