Information for 8-TTTGTCCTCTAGD (Motif 5)

A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
Reverse Opposite:
G A T C G T A C C G A T C G T A A C T G C G T A A C T G A C T G C G T A G T A C C G T A C G T A G T C A
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 22.9bp
Average Position of motif in Background57.0 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTTGTCCTCTAGD
--TGACCTYA---
 A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTCCTCTAGD
WCATTTTGKCCTCYT--
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTGTCCTCTAGD
--TGACCYCT---
 A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTCCTCTAGD-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCCTCTAGD
CNNTTGACCTTTG--
 A C G T A C G T A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCCTCTAGD-
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCCTCTAGD-
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTGTCCTCTAGD
-GTGACCTT----
 A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTGTCCTCTAGD
--TGACCT-----
 A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTGTCCTCTAGD
CCTTTGTTTT-----
 A C G T A C G T A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G A T A G T C A C G T C G T A A C T G C A T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T