Information for 7-TCCWTATGAAATG (Motif 4)

A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A G C T A T G C C G T A C G A T C G T A C G A T A C T G C T A G C T G A
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 28.9bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCWTATGAAATG
AACCTTATAT----
 A C G T A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCCWTATGAAATG
---TTATGCAAT-
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCWTATGAAATG
-CCYMATAAAA--
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCCWTATGAAATG-
----TTTGAAACCG
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCCWTATGAAATG
--CCTTTGATGT-
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCWTATGAAATG-----
-NANTTTCAAGTGGTTAN
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCCWTATGAAATG
--CCTTTGAWGT-
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCWTATGAAATG
-NATTGTGCAAT-
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCCWTATGAAATG
---ATTTGAATT-
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCCWTATGAAATG-
------TGGAATGT
 A G C T A G T C A G T C C G T A A C G T G C T A A C G T A T C G C T G A C G T A C G T A G A C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T