Information for 10-ATGCCCTCTCCAG (Motif 14)

T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
Reverse Opposite:
G T A C A C G T A C T G A C T G C G T A C T A G C G T A A C T G A C T G A T C G A T G C G C T A A G C T
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.806
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.6 +/- 28.8bp
Average Position of motif in Background48.1 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGCCCTCTCCAG
---NSCACTYVAV
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATGCCCTCTCCAG
--AGCCACTCAAG
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGCCCTCTCCAG
--AASCACTCAA-
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCCTCTCCAG-
NNAGTCCCACTCNNNN
 A C G T A C G T T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGCCCTCTCCAG-
CTATCCCCGCCCTATT
 A C G T A C G T T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGCCCTCTCCAG
ATGCCCACC----
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATGCCCTCTCCAG
---RSCACTYRAG
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATGCCCTCTCCAG
---CCCCCCCC--
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGCCCTCTCCAG
-TGACCTYA----
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGCCCTCTCCAG
-TGACCYCT----
 T C G A C A G T A T C G A T G C A G T C A G T C C G A T A G T C A C G T A G T C G T A C T C G A A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T