Information for 5-AATGYGCCCR (Motif 11)

C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G
Reverse Opposite:
G A T C A C T G A C T G A C T G A T G C C T A G A G T C C G T A A C G T C G A T
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.787
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif81.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets40.7 +/- 24.7bp
Average Position of motif in Background53.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AATGYGCCCR--
---ATGCCCACC
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATGYGCCCR----
AAGCATACGCCCAACTT
 A C G T A C G T A C G T C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AATGYGCCCR--
---CTGCCCGCA
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AATGYGCCCR-----
GGGTGTGCCCAAAAGG
 A C G T C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AATGYGCCCR-
--CGTGCCAAG
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATGYGCCCR
AGCGCGCC--
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AATGYGCCCR--
---ATGCCAACC
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AATGYGCCCR
----TGCCAA
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATGYGCCCR-
-CTGTTCCTGG
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATGYGCCCR--
--GGTGCCAAGT
 C G T A G T C A C G A T C T A G G A T C A T C G A G T C A G T C G T A C C T A G A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T