Information for 5-GCGACGGTGTCCTTGG (Motif 9)

A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
Reverse Opposite:
A G T C A T G C G T C A C T G A A C T G A T C G G T C A A T G C C T G A A G T C A G T C A T C G A C G T A G T C A C T G G T A C
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 21.1bp
Average Position of motif in Background46.1 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG
-----BNTGDCCTTG-
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG-
-------TGACCTTGAN
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG-
-------TGACCTTGAV
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGACGGTGTCCTTGG
TGGGCGACGTCGTTAA---
 A C G T A C G T A C G T A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG
------CTGACCTTTG
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG
------CTGTTCCTGG
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCGACGGTGTCCTTGG
------NTGACCTTGA
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG----
-----GCTGACCTTGAACTN
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG
------GTGACCTT--
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCGACGGTGTCCTTGG---
--NNNNATGACCTTGANTN
 A C T G A G T C A C T G C G T A A T G C A C T G A C T G A G C T A T C G A C G T A T G C A G T C A G C T A C G T A T C G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A