Motif 18

Information for 13-CGCGGCTGCTCCG (Motif 18)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.600e+01
Information Content per bp:	1.892
Number of Target Sequences with motif	6.0
Percentage of Target Sequences with motif	0.87%
Number of Background Sequences with motif	11.7
Percentage of Background Sequences with motif	0.03%
Average Position of motif in Targets	59.5 +/- 14.1bp
Average Position of motif in Background	47.8 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)	1.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:	1
Score:	0.69
Offset:	7
Orientation:	forward strand
Alignment:	CGCGGCTGCTCCG -------GCTCCG

NHLH1/MA0048.2/Jaspar

Match Rank:	2
Score:	0.68
Offset:	0
Orientation:	forward strand
Alignment:	CGCGGCTGCTCCG CGCAGCTGCG---

PB0003.1_Ascl2_1/Jaspar

Match Rank:	3
Score:	0.62
Offset:	-3
Orientation:	forward strand
Alignment:	---CGCGGCTGCTCCG- CTCAGCAGCTGCTACTG

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:	4
Score:	0.62
Offset:	0
Orientation:	forward strand
Alignment:	CGCGGCTGCTCCG AGCAGCTGCTNN-

Ascl2/MA0816.1/Jaspar

Match Rank:	5
Score:	0.62
Offset:	0
Orientation:	reverse strand
Alignment:	CGCGGCTGCTCCG AGCAGCTGCT---

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:	6
Score:	0.60
Offset:	3
Orientation:	forward strand
Alignment:	CGCGGCTGCTCCG ---CNGTCCTCCC

Myod1/MA0499.1/Jaspar

Match Rank:	7
Score:	0.60
Offset:	0
Orientation:	forward strand
Alignment:	CGCGGCTGCTCCG TGCAGCTGTCCCT

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:	8
Score:	0.59
Offset:	1
Orientation:	forward strand
Alignment:	CGCGGCTGCTCCG -NCAGCTGCTG--

Myog/MA0500.1/Jaspar

Match Rank:	9
Score:	0.58
Offset:	-1
Orientation:	reverse strand
Alignment:	-CGCGGCTGCTCCG NNGCAGCTGTC---

PB0151.1_Myf6_2/Jaspar

Match Rank:	10
Score:	0.57
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGCGGCTGCTCCG GGNGCGNCTGTTNNN