Information for 4-GCCCAGCTTG (Motif 16)

A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G
Reverse Opposite:
A T G C T C G A G T C A T A C G A T G C A G C T A T C G A T C G T A C G T A G C
p-value:1e-7
log p-value:-1.655e+01
Information Content per bp:1.602
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.94%
Number of Background Sequences with motif1272.3
Percentage of Background Sequences with motif3.59%
Average Position of motif in Targets49.6 +/- 23.9bp
Average Position of motif in Background50.2 +/- 50.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCCCAGCTTG
---AAGCTTG
 A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGCTTG
TGCCCAGNHW-
 A C G T A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCTTG---
CCACACAGCAGGAGA
 A C G T A C G T A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCTTG---
GAGCACAGCAGGACA
 A C G T A C G T A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCTTG
DCTCAGCAGG
 A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCCAGCTTG--
--CCAGCTGTTN
 A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCCAGCTTG
---CAGCC--
 A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCTTG-----
DCHCAGCAGGRGGCC
 A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCTTG---
CCACACAGCAGGAGA
 A C G T A C G T A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCCAGCTTG--
--NCAGCTGCTG
 A T C G A T G C T A G C T A G C T C G A T A C G A T G C C A G T A G C T T A C G A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G