Information for 1-CGGCCCCGGGGGG (Motif 1)

A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G
Reverse Opposite:
G T A C A G T C A G T C A T G C G T A C A G T C A C T G A T C G C T A G A C T G G T A C A G T C A C T G
p-value:1e-14
log p-value:-3.338e+01
Information Content per bp:1.882
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.1 +/- 22.3bp
Average Position of motif in Background48.0 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCCGGGGGG-
ACCCCCCCGGGGGGN
 A C G T A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCCGGGGGG-
NCCCCCCCGGGGGGN
 A C G T A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGCCCCGGGGGG-
CACCCCCGGGGGGG
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGGCCCCGGGGGG
-GTCCCCAGGGGA
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGGCCCCGGGGGG-----
-ANTNCCGGGGGGAANTT
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGCCCCGGGGGG
-TGCCCNGGGGCA
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGCCCCGGGGGG-
-TGCCCTGAGGGCA
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGCCCCGGGGGG-
-TGCCCTNAGGGCA
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PLAG1/MA0163.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGCCCCGGGGGG
GGGGCCCAAGGGGG
 A C G T A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGCCCCGGGGGG
-TGCCCTNGGGCA
 A G T C A C T G A C T G A G T C A G T C A T G C A G T C A C T G A C T G A T C G A C T G T A C G A C T G
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A