Information for 3-TCTAACCCAT (Motif 9)

A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A
p-value:1e-2
log p-value:-6.317e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background64.9 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCTAACCCAT----
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTAACCCAT
GCTAATCC--
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCTAACCCAT
--TAATCCCN
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTAACCCAT
NYTAATCCYB
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTAACCCAT
-TTAATCCC-
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTAACCCAT----
NNTAATCCNGNCNN
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTAACCCAT
CTTAATCCC-
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTAACCCAT
GCTAATCCCC
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTAACCCAT
-YTAATCCY-
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTAACCCAT--
--TTCCCCCTAC
 A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C