Information for 5-AARWYTTRTTYMTKKM (Motif 6)

C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G G T A C G T A C C G T A A C G T T C A G C G T A C G T A A G C T C G T A C G T A C T G A C G A T A G C T A C G T A C G T
p-value:1e-4
log p-value:-9.259e+00
Information Content per bp:1.791
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif96.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets49.2 +/- 22.5bp
Average Position of motif in Background47.8 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AARWYTTRTTYMTKKM-
--NTNTTGTTGTTTGTN
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C A C G T
A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AARWYTTRTTYMTKKM
-----TTGTTTAC---
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AARWYTTRTTYMTKKM
------TGTTTATTT-
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AARWYTTRTTYMTKKM
NNNNTTTGTTTACNNT
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AARWYTTRTTYMTKKM
-ACTTTCGTTTCT---
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AARWYTTRTTYMTKKM
---TATTGTTTATT--
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AARWYTTRTTYMTKKM
NAATTTTATTACCNNN
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AARWYTTRTTYMTKKM
----TTTGTTTACTTA
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AARWYTTRTTYMTKKM
AANTTATTGTTCTNNA-
 A C G T C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AARWYTTRTTYMTKKM----
----TTTATTAATTGCNNGN
 C G T A C G T A C T G A C G T A A G C T A C G T A C G T C T G A A C G T A C G T A G C T G T C A A C G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T