Information for 5-GACATAAAAACTACTT (Motif 14)

A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
Reverse Opposite:
C G T A C G T A A C T G C G A T C G T A A C T G A C G T A C G T C G A T G A C T A G C T C G T A A C G T A T C G C G A T A G T C
p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.762
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets39.8 +/- 21.3bp
Average Position of motif in Background48.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACATAAAAACTACTT
GGAAANTGAAACTNA--
 A C G T A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACATAAAAACTACTT
GTCATAAAAN------
 A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GACATAAAAACTACTT
GAAACTGAAACT----
 A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACATAAAAACTACTT
AAGCCATAAAA-------
 A C G T A C G T A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GACATAAAAACTACTT
GAAAMTGAAACT----
 A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACATAAAAACTACTT
GGTAATAAAAA------
 A C G T A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GACATAAAAACTACTT---
--CAAATTAATTAATAAAA
 A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T A C G T A C G T A C G T
A C G T A C G T A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACATAAAAACTACTT
AGAGCCATAAAATTCG---
 A C G T A C G T A C G T A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GACATAAAAACTACTT---
--GANGTTAACTAGTTTNN
 A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACATAAAAACTACTT
TGCCAAAATAAACANN-
 A C G T A C T G C G T A A T G C C G T A C G A T C T G A C T G A C G T A C G T A C G T A G T A C A C G T C G T A T G A C C G A T C G A T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T