Information for 4-ATTTAAATAG (Motif 12)

C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
Reverse Opposite:
T A G C G A C T C G T A A G C T G A C T A C G T C T G A C G T A G T C A A C G T
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.828
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif6.27%
Number of Background Sequences with motif565.7
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets48.2 +/- 22.2bp
Average Position of motif in Background50.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAAATAG
NATTCAAAT--
 A C G T C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATTTAAATAG
ATTTGCATA-
 C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATTTAAATAG
--TTAATTAG
 C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

PH0147.1_Pou3f2/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAATAG----
GATAATTAATTAGTTTG
 A C G T A C G T A C G T C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTTAAATAG-
AATTAATTAGT
 C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATAG
TATGTAAATAT
 A C G T C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTTAAATAG
CCAAAAATAG
 C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATAG-
DCYAAAAATAGM
 A C G T C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAAATAG-
KCCAAAAATAGC
 A C G T C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTTAAATAG
ATTTGCATA-
 C G T A C A G T C G A T G A C T C G T A C T G A C T G A C G A T C T G A A T C G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T