Information for 23-CGCAAAAGGCCAC (Motif 37)

A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 31.1bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCAAAAGGCCAC---
GGCAAAAGTCCAATAA
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CGCAAAAGGCCAC
-----AAGGTCAC
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCAAAAGGCCAC---
TCTCAAAGGTCACCTG
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGCAAAAGGCCAC-
----CAAGGHCANV
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCAAAAGGCCAC---
TCTCAAAGGTCACGAG
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCAAAAGGCCAC
ANGNAAAGGTCA-
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCAAAAGGCCAC
---CAAAGGTCAG
 A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCAAAAGGCCAC
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAAGGCCAC
AAAGGTCAAAAGGTCA-
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCAAAAGGCCAC
TAGGGCAAAGGTCA-
 A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T