Information for 18-TGGACTCGGAGCT (Motif 29)

A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T
Reverse Opposite:
C G T A A T C G A G T C A C G T A G T C A G T C C T A G C G T A A C T G A G C T A G T C A G T C G T C A
p-value:1e-6
log p-value:-1.420e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.1 +/- 21.7bp
Average Position of motif in Background53.4 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TGGACTCGGAGCT
------CGGAGC-
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTCGGAGCT-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGACTCGGAGCT---
TGGACTTTGNNCTNTG
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGACTCGGAGCT--
TGGACTTTGNNCTCN
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTCGGAGCT
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGGACTCGGAGCT
--GAGSCCGAGC-
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTCGGAGCT
CTGACCTTTG----
 A C G T A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGACTCGGAGCT
GGGAATTGTAGT-
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGACTCGGAGCT-
TGACCTTTGACCTC
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

EHF/MA0598.2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGACTCGGAGCT-
--AACCCGGAAGTA
 A C G T A C T G A C T G C T G A A G T C A C G T A G T C A C T G A C T G C G T A A C T G A T G C A C G T A C G T
A C G T A C G T G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A