Information for 6-TGCTCTAGCC (Motif 28)

A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.529e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.0 +/- 11.5bp
Average Position of motif in Background41.4 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGCTCTAGCC--
GGCTCYAKCAYC
 A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCTCTAGCC--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGCTCTAGCC---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCTCTAGCC-
-TGTCTAGACG
 A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTCTAGCC
NGCTN-----
 A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCTCTAGCC--
----BCAGACWA
 A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCTCTAGCC--
-NNACTTGCCTT
 A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGCTCTAGCC-
-GGTCCCGCCC
 A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGCTCTAGCC
AGGTCTCTAACC
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCTAGCC
CTGTTCCTGG-
 A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A A C T G A G T C A G T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T