Information for 8-CSKCCCGGGTGCSCGG (Motif 11)

A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A T C G A C T G A G T C C G T A A G T C A G T C A G T C C T A G A T C G A C T G G T A C A T C G A C T G
p-value:1e-6
log p-value:-1.561e+01
Information Content per bp:1.889
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 17.7bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CSKCCCGGGTGCSCGG
----GCGCCTGCGCA-
 A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G
A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CSKCCCGGGTGCSCGG
NCCCCCCCGGGGGGN---
 A C G T A C G T A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CSKCCCGGGTGCSCGG
CCCCCCCGGGGGNN---
 A C G T A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CSKCCCGGGTGCSCGG
ACCCCCCCGGGGGGN---
 A C G T A C G T A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CSKCCCGGGTGCSCGG-
-----NGCGTGGGCGGR
 A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CSKCCCGGGTGCSCGG-
--------ATGCCCACC
 A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CSKCCCGGGTGCSCGG--
--TTGGGGGCGCCCCTAG
 A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CSKCCCGGGTGCSCGG----
----NCANGCGCGCGCGCCA
 A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

KLF16/MA0741.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CSKCCCGGGTGCSCGG-
------GGGGGCGTGGC
 A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CSKCCCGGGTGCSCGG---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A T C G A C G T A G T C A T G C A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T C G A G T C A C T G A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G