Information for 2-GTGGYCCGCCCCGCCC (Motif 3)

A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C
Reverse Opposite:
A C T G A T C G A C T G A G T C C T A G A C T G A T C G A C T G A G T C C T A G A C T G C T G A A T G C A G T C G T C A G T A C
p-value:1e-14
log p-value:-3.453e+01
Information Content per bp:1.827
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.4 +/- 24.6bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:GTGGYCCGCCCCGCCC--
------GGCCCCGCCCCC
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGGYCCGCCCCGCCC-
--GCCCCGCCCCCTCCC
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GTGGYCCGCCCCGCCC---
-----NAGCCCCGCCCCCN
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.66
Offset:7
Orientation:forward strand
Alignment:GTGGYCCGCCCCGCCC-
-------GCCCCGCCCC
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:GTGGYCCGCCCCGCCC-
-------GCCCCACCCA
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:GTGGYCCGCCCCGCCC---
-------GCTCCGCCCMCY
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTGGYCCGCCCCGCCC----
-----NRGCCCCRCCCHBNN
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTGGYCCGCCCCGCCC----
----TCGACCCCGCCCCTAT
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GTGGYCCGCCCCGCCC--
-------GCCCCGCCCCC
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GTGGYCCGCCCCGCCC-
-------GCCMCRCCCH
 A C T G A C G T A C T G T A C G G A C T A G T C A G T C A C T G A G T C A T G C A G T C A G T C A C T G A G T C T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T